Owen D. Solberg, Steven J. Mack, Alex K. Lancaster, Richard M. Single, Yingssu Tsai, Alicia Sanchez-Mazas, and Glenys Thomson
Hum Immunol (2008), doi: 10.1016/j.humimm.2008.05.001

The literature datasets

The First author, year column links to the PubMed record for the published work.
Last 8 columns indicate the 2n sample size for each of the classical HLA loci studied. Clicking on the number will display the PyPop-formatted datafile for that population and locus.
All of the literature datasets, in PyPop format, may be downloaded together here: literature-datasets.zip

region	popname	First author, year	A	C	B	DRB1	DQA1	DQB1	DPA1	DPB1
EUR	Austria_1993	Pickl 1993								980
EUR	Basques_1998	Comas 1998							200	196
EUR	Basques_2003	Perez-Miranda 2003					224
EUR	Basques_2004	Perez-Miranda 2004							232	192
EUR	Breton_1995	Raguenes 1995								300
EUR	British_1992	Doherty 1992					354	354
EUR	British_1994	Sage 1994								374
EUR	British_1994b	Wu 1994					118	100	122	124
EUR	Bulgarians_2002	Ivanova 2002	110		110	110
EUR	Cabuernigos_2003	Sanchez-Velasco 2003				190	190
EUR	Cantabrians_1999	Sanchez-Velasco 1999				400	400	400
EUR	Catalan_1998	Comas 1998					174		176	172
EUR	ChuvashianRussian_2003	Arnaiz-Villena 2003				164		164
EUR	Corsican_1994	Haras 1994					72
EUR	Cretan_1999	Arnaiz_Villena 1999				270	270	270
EUR	Croatian_2000	Grubic 2000					420
EUR	Czech_1992	Cerna 1992				198
EUR	Danish_1992	Hviid 1992								142
EUR	Dobrinj_1997	Martinovic 1997					56	56
EUR	Dubasnica_1997	Martinovic 1997				46	46	42
EUR	English_1991	Sage 1991								84
EUR	French_1991	Al-Daccak 1991							120	120
EUR	French_2001	Bera 2001								354
EUR	German_1993	Yao 1993								412
EUR	Greece_1999	Pratsidou-Gertsi 1999					196	196		196
EUR	Greece_2000	Papassavas 2000								492
EUR	Greek_1995	Reveille 1996					96			96
EUR	Italian_1992	Mazzola 1992								174
EUR	Italian_1998	Lulli 1998					106	106
EUR	Italian_2002	Perri 2002					358	358
EUR	Macedonian_1995	Kocova 1995					206	206
EUR	Macedonian_2001	Arnaiz-Villena 2001				344
EUR	Macedonian_2004	Petlichkovski 2004				316
EUR	NorthIreland_1992	Savage 1992								300
EUR	Norwegian_1990	Ronningen 1990				362
EUR	Norwegian_1990b	Spurkland 1990							264	264
EUR	Norwegian_1993	Ploski 1993					47	47
EUR	Norwegian_1997b	Lin 1997				198	198	198
EUR	Pasiegos_1999	Sanchez-Velasco 1999				300	300	300
EUR	Polish_1998	Krokowski 1998					206
EUR	Pomors_2002	Evseeva 2002					146
EUR	Portuguese_2005	Spinola 2005	290		290	290
EUR	Romanian_1992	Reed 1992					152	134	166
EUR	Sardinian_1992	Congia 1992								98
EUR	Sardinian_2000b	Lampis 2000				2738	2738	2738
EUR	Slavic_1999	Kapustin 1999				400	200	200		200
EUR	Slovak_1998	Cechova 1998						286		292
EUR	Slovenian_2002	Petrone 2002				280
EUR	Spanish_2001	Muro 2001				346	346	346
EUR	Spanish_2002	Vidal 2002				1882
EUR	Svans_2001	Sanchez-Velasco 2001	160		160	160	160	160		160
EUR	Swedish_1994	Allen 1994				350	350	350		348
EUR	Swedish_1996	Aldener-Cannava 1996							200
EUR	Swedish_2001	Aldener-Cannava 2001								400
EUR	Vrbnik_1997	Martinovic 1997				56	56	56
EUR mig	Argentinian_1994	Fainboim 1994						206
EUR mig	AustralianCaucasian_1993	Lienert 1993								100
EUR mig	Azorean_2005	Spinola 2005	462	258	462	462	258	258
EUR mig	Caucasian_1992	Perdriger 1992								296
EUR mig	Caucasian_1994	Begovich 1994					480	480		480
EUR mig	Caucasian_1997	Vambergue 1997					190			190
EUR mig	Caucasian_1997b	Reil 1997				222
EUR mig	CentralEuropeanCaucasian_1994	Haas 1994					400	400
EUR mig	CEPH_1992	Begovich 1992					266	265		266
EUR mig	CEPH_1995	Klitz 1995					248
EUR mig	CEPH_2000	Bugawan 2000		248		248		248	248	248
EUR mig	EuroAm_2003	Klitz 2003				3798	3798	3798
EUR mig	USCaucasian_1992	Sawitzke 1992								240
EUR mig	USCaucasian_1992b	Yunis 1992					196
EUR mig	USCaucasian_1994	Morel 1994					350	350
EUR mig	USCaucasian_1995	Fernandez-Vina 1995			326
EUR mig	WhitesUS_2003	Rossman 2003				536		536		536
NAF	Algerian_1994	Djouiah 1994					94
NAF	Gabes_2006	Abdennaji Guenounou 2006				192
NAF	Jerba_2006	Abdennaji Guenounou 2006						110
NAF	Matmata_2006	Abdennaji Guenounou 2006				162		162
NAF	MetalsaBerber_2004	Piancatelli 2004		126
NAF	Tunisia_1995	Hmida 1995						202		202
NAF	Tunisian_2004	Ayed 2004	200	200		200	200			200
NAF	TunisiansTunis_2006	Hajjej 2006				206		208
NAF mig	NorthAfricanParis_2006	Pedron 2006	187	187	187	187		187
NAM	Athabaskan_1998	Monsalve 1998				124	124	124
NAM	Eskimo_1998	Grahovac 1998				160	160	160
NAM	LakotaSioux_2004	Leffell 2004	404	390	404	404		140
NAM	MexicanMazatecan_2000	Arnaiz-Villena 2000				142	142	142
NAM	Penutian_1998	Monsalve 1998				52
NAM	Seri_2001	Williams 2001			58
NEA	Ainu_1996	Bannai 1996				100		100
NEA	Ainu_2000	Bannai 2000	100		100
NEA	Buryat_2002	Uinuk-ool 2002				50	50	50
NEA	Chukchi_1998	Grahovac 1998				118	118	118
NEA	Evenk_1998	Grahovac 1998				70	70	70
NEA	Han_2005	Hong 2005	210	210	210
NEA	HanChinese1236_2006	Yang 2006	1236		1236	1236
NEA	Hui_2007	Hong 2007	220	220	220
NEA	Japanese_1992	Mizuki 1992				90
NEA	Japanese_1992b	Mitsunaga 1992								420
NEA	Japanese_1995	Geng 1995				100	100	100		100
NEA	Japanese_1995a	Mitsunaga 1995						200
NEA	Japanese_1995b	Mitsunaga 1995				200
NEA	Japanese_1997	Tokunaga 1997	234	234	234
NEA	Japanese_1997c	Lin 1997				1436	1436	1436
NEA	Japanese_1999	Ohta 1999					102			102
NEA	Japanese_2000b	Saito 2000	742	742	742	742		742
NEA	Japanese_2002	Horiki 2002				124		124
NEA	Japanese_2002b	Kitawaki 2002		330		330
NEA	Japanese_2005	Itoh 2005	2036	2036	2036	2036
NEA	Ket_1998	Grahovac 1998				44	44	44
NEA	KhalkhMongolian_1997	Munkhbat 1997								82
NEA	KhotonMongolian_1997	Munkhbat 1997								170
NEA	Korean_1999	Park 1999				1020
NEA	Korean_2005	Lee 2005	970	970	970	970		970
NEA	Korean_2007	Lee 2007					934
NEA	Koreans_2004	Song 2004				1600
NEA	Koryak_1998	Grahovac 1998				184	184	184
NEA	Mansi_2002	Uinuk-ool 2002				136	136
NEA	Mongolian_2007	Hong 2007	204	204	204
NEA	Negidal_2002	Uinuk-ool 2002				70	70	70
NEA	Nentsy_2002	Evseeva 2002					110
NEA	Nganasan_2004	Uinuk-ool 2004				48	48	48
NEA	Nivkh_1998	Grahovac 1998				64	64	64
NEA	Nivkhi_1998	Lou 1998						106
NEA	OkhotskEvenki_2002	Uinuk-ool 2002				50	50	50
NEA	OkinawaJapanese_1997	Akisaka 1997				258	258	258
NEA	Oold_2003	Machulla 2003				104		104
NEA	Saami_2002	Evseeva 2002					162
NEA	Siberian_1998	Lou 1998				106		106
NEA	Todja_2002	Uinuk-ool 2002				44	44
NEA	Tofalar_2002	Uinuk-ool 2002				86	86	86
NEA	Tuva_2001	Begovich 2001							338
NEA	Tuva_2002	Uinuk-ool 2002				88	88	88
NEA	Udegey_1998	Grahovac 1998				46	46	46
NEA	Ulchi_2002	Uinuk-ool 2002				146	146	146
OCE	Borneo_1999	Zimdahl 1999				42				42
OCE	CookIslands_2001	Velickovic 2001							100	100
OCE	CookIslands_2002	Velickovic 2002				100		100
OCE	Fijian_1992	Gao 1992				114	114	114
OCE	Goroka_2001	Main 2001	78	86	70
OCE	IndonesiaSingapore_2000	Mack 2000				100
OCE	Javanese_1999	Zimdahl 1999				118				118
OCE	Karimui_2001	Main 2001	168	160	160
OCE	Kiribati_1992	Gao 1992				124	124	124
OCE	Madang_1992	Gao 1992				130	130	130
OCE	Madang_2001	Main 2001	118	116	110
OCE	Maori_2006	Tracey 2006				400		374		398
OCE	Nauru_1992	Gao 1992				134	134	134
OCE	NewCaledonia_1992	Gao 1992				130	130	130
OCE	NewCaledonians_2001	Main 2001	84	90	84
OCE	NewGuinean_1997	Lin 1997				190	190	190
OCE	Niue_1992	Gao 1992				140	140	140
OCE	PapuaNewGuineaHighlanders_1999	Zimdahl 1999				56				56
OCE	PapuaNewGuinean_1992	Gao 1992				114	114	114
OCE	PNGAbam_2000	Ohashi 2000				126
OCE	PNGDorogori_2000	Ohashi 2000				118
OCE	PNGIamega_2000	Ohashi 2000				158
OCE	PNGKapal_2000	Ohashi 2000				130
OCE	PNGKuru_2000	Ohashi 2000				92
OCE	PNGPodare_2000	Ohashi 2000				86
OCE	PNGRual_2000	Ohashi 2000				100
OCE	PNGUme_2000	Ohashi 2000				180
OCE	PNGWipim_2000	Ohashi 2000				110
OCE	PNGWoigi_2000	Ohashi 2000				52
OCE	PNGWonie_2000	Ohashi 2000				102
OCE	PNGWuroi_2000	Ohashi 2000				68
OCE	Rabaul_1992	Gao 1992				120	120	120
OCE	Rabaul_2001	Main 2001	96	56	76
OCE	Rarotongan_1992	Gao 1992				156	156	156
OCE	Roro_1999	Zimdahl 1999				52				52
OCE	Samoa_2001	Velickovic 2001							100	100
OCE	Samoa_2002	Velickovic 2002				100		100
OCE	Samoan_2000	Mack 2000								58
OCE	Tokelau_2001	Velickovic 2001							100	100
OCE	Tokelau_2002	Velickovic 2002				100		100
OCE	Tolai_1999	Zimdahl 1999				96				96
OCE	Tonga_2001	Velickovic 2001							100	100
OCE	Tonga_2002	Velickovic 2002				100		100
OCE	TrobriandIslanders_1999	Zimdahl 1999				162				162
OCE	Wanigela_2001	Main 2001	142	144	132
OCE	WesternSamoa_1999	Zimdahl 1999				44				44
OCE	WestSamoa_1992	Gao 1992				102	102	102
OCE	WestSchader_2001	Main 2001	120	122	110
OCE	Wosera_2001	Main 2001	78	112	138
OCE mig	Filipino_1994	Bugawan 1994				210		210		180
OTH mig	AfricanAmerican_1997	Just 1997					482	482		482
OTH mig	AfricanAmerican564_2007	Tu 2007	1128	1128	1128	1128
OTH mig	BlacksUS_2003	Rossman 2003				386		386		386
OTH mig	Brazilian_2001b	Volpini 2001					107
OTH mig	CaboVerde_2005	Spinola 2005	248		248	248
OTH mig	EcuadorianAfricans_2001	Begovich 2001							116	116
OTH mig	Martinique_2001	Bera 2001								200
OTH mig	Mestizo_2004	Cortes 2004					108	108
OTH mig	MexicanAmerican_1993	Erlich 1993				231
OTH mig	MexicanAmerican_1996	Erlich 1996								225
OTH mig	MexicanJalisco_2004	Cortes 2004					108	108
OTH mig	MexicanMestizo_2005	Leal 2005	206		206
OTH mig	MixedHawaiian_2000	Mack 2000								76
SAM	Ache_2003	Tsuneto 2003				174		174
SAM	Arhuacos_1994	Yunis 1994					123	118
SAM	Arsario_1996	Briceno 1996								100
SAM	Bari_1994	Guedez 1994				110
SAM	Bari_1995	Layrisse 1995					116	116
SAM	Bari_2004	Gendzekhadze 2004							196	196
SAM	Cayapa_2001	Begovich 2001							166	166
SAM	Chilean_1997	Blagitko 1997				86
SAM	Chilean_1999	Perez-Bravo 1999					248	248
SAM	Colombian_1997	Blagitko 1997				42
SAM	Coreguaje_1996	Briceno 1996								90
SAM	EasternToba_1993	Cerna 1993				270	270	270		270
SAM	EasternToba_1997	Fernandez-Vina 1997	168		232
SAM	Embera_1996	Briceno 1996								98
SAM	Ijka_1996	Briceno 1996								80
SAM	Kaingang_2003	Tsuneto 2003						418
SAM	Kogi_1994	Yunis 1994					67	63
SAM	Kogui_1996	Briceno 1996								100
SAM	Kogui_2000	Middleton 2000	100
SAM	Kolla_2001	Little 2001	140
SAM	Mataco_1992	Vullo 1992								120
SAM	MatacoWichi_1993	Cerna 1993				98	98			98
SAM	MatacoWichi_1997	Fernandez-Vina 1997	88		92
SAM	TerenaIndians_1999	Lazaro 1999	120	94	116	118		120
SAM	Vaupes_1996	Briceno 1996								92
SAM	Warao_2004	Gendzekhadze 2004							68	68
SAM	Wayu_1994	Yunis 1994					111	114
SAM	Wayuu_1996	Briceno 1996								108
SAM	Xavantes_1993	Cerna 1993				148	148	148		148
SAM	Yucpa_2001	Layrisse 2001	146	146	146					146
SAM	Yucpa_2004	Gendzekhadze 2004							232	232
SEA	Chinese_1991	Gao 1991					182	182		176
SEA	Chinese_1996	Aldener-Cannava 1996							80
SEA	Chinese_2001	Aldener-Cannava 2001								80
SEA	Chinese_2001b	Chowdari 2001						172
SEA	ChineseTaiwan_1999	Chen 1999					130	130
SEA	HaniChinese_2005	Hu 2005								94
SEA	JingChinese_2003	Lin 2003				276		236		274
SEA	Lisu_2007	Chen 2007	222			222		222		222
SEA	Manchu_1995	Geng 1995					94	94		96
SEA	Maonan_2007	Ogata 2007	216		216	216
SEA	MeizhouHan_2007	Chen 2007	198	200	200
SEA	MiaoHmong_2006	Liu 2006				168		158		168
SEA	Naxi_2003	Fu 2003				188		146		192
SEA	Naxi_2006	Shi 2006				236
SEA	Nu_2007	Chen 2007	214	214	214	214		214		214
SEA	NuChinese_2006	Hu 2006								144
SEA	Pumi_2002	Liu 2002								102
SEA	ShandongHanChinese_2006	Zhou 2006				196		196		196
SEA	ShanghaiChinese_1992	Wang 1992							208	208
SEA	ShanghaiChinese_1993	Zhao 1993						116
SEA	Taiwanese_1999	Zimdahl 1999				96				96
SEA	Taiwanese_2007	Huang 2007				662
SEA	Thai_1998	Dharakul 1998				210	210	210
SEA	Thai_1999	Nathalang 1999				100
SEA	Thai_2002	Pimtanothai 2002			98
SEA	Thai_2002b	Sirikong 2002						374
SEA	Thai_2006	Wongsurawat 2006						248
SEA	Tibetan_2006	Chen 2006	316	316	316
SEA	Yao_2006	Liu 2006				126		114		132
SEA	YunnanHan_2006	Shi 2006				258
SSA	Akan_2001	Ellis 2001			88
SSA	AkaPygmies_2001	Renquin 2001								162
SSA	Bamileke_2006	Torimiro 2006	154	154
SSA	Betis_2006	Torimiro 2006	348	348
SSA	Cameroon_2000	Ellis 2000	182		184
SSA	Cameroon_2001	Begovich 2001							344	344
SSA	Cameroon_2001b	Pimtanothai 2001				252	252	252
SSA	Gabonese_1998	May 1998							240	240
SSA	Gambia_1996	Aldener-Cannava 1996							200
SSA	Gambian_2001	Begovich 2001							292	292
SSA	GuineBissau_2005	Spinola 2005	130		130	130
SSA	Nigerian_1998	May 1998							260	260
SSA	Oromo_1998	Fort 1998				166	166
SSA	Sudanese_1992	Magzoub 1992								194
SSA	Ugandan_2001	Begovich 2001							94	94
SSA	WestAfrican_2001	Aldener-Cannava 2001								200
SSA	Zulu_2001	Williams 2001			200
SWA	AsianIndian_1996	Taneja 1996				170
SWA	Baloch_2004	Farjadian 2004	200	200	200			200
SWA	Brahui_2003	Mohyuddin 2003	174
SWA	EasternIndian_1999	Sanjeevi 1999					240	240
SWA	EastIndian_2001	Begovich 2001							118	118
SWA	Hazara_2003	Mohyuddin 2003	52
SWA	Iranian_1998	Amirzargar 1998					200
SWA	Iranian_2001	Amirzargar 2001				200
SWA	Lebanese_2006	Buhler 2006		194
SWA	Maratha_2005	Shankarkumar 2005		182
SWA	Nadar_2003	Shankarkumar 2003	122	122	122
SWA	NorthIndian_2002	Rajalingam 2002	104		104
SWA	NorthIndian_2007	Rani 2007		162	182
SWA	NorthIndianHindu_2007	Agrawal 2007				404	404	404
SWA	Parsi_2003	Mohyuddin 2003	180
SWA	Saudi_2002	Al-Hussein 2002				100				100
SWA	Sindhi_2003	Mohyuddin 2003	158
SWA	Turkish_2001	Tuysuz 2001					100

The AlleleFrequencies.net datasets

The authoritative source of this data is allelefrequencies.net.
These files are provided here as a convenience for those wishing to use the data in PyPop format.
These files will not reflect any updates or additions made to the allelefrequencies.net database.
Last 8 columns indicate the 2n sample size for each of the classical HLA loci studied. Clicking on the number will display the PyPop-formatted datafile for that population and locus.
All of the AlleleFrequencies.net datasets, in PyPop format, may be downloaded together here: allelefrequenciesnet-datasets.zip

region	popname		A	C	B	DRB1	DQA1	DQB1	DPA1	DPB1
EUR	Belguim	Andrien 1997	198							198
EUR	Croatia	Cecuk 2002	300		300
EUR	FranceCeph	Begovich 2000					248
EUR	FranceSouthEast	Dubois 1996		260	260	260		260
EUR	GermanEssen	Ferencik 1996				348	348	348		348
EUR	IrelandNorthern	Midd] 1999				2000
EUR	ItalyCentral	Adorno 1997				650	358	370		760
EUR	ItalyNorthpop1	Ferrara 1998	52			194	194	194		100
EUR	Macedoniapop1	Spiroski 2001				316
EUR	Macedoniapop2	Hristova-Dimceva 1997				160		160
EUR	Romanian	Suciu-Foca 2000	696		696
EUR	RussiaArkhangelskPomors	RUSSIA 1998						126
EUR	RussiaMurmanskSaomi	RUSSIA 1997					140
EUR	RussiaNenets	RUSSIA 1996					110	110
EUR	RussiaNorthwest	RUSSIA 2002					156
EUR	SpainBasque	Sanchez-Velasco 2002				166	166
EUR	SpainGranada	Oliver 1995						560
EUR	SpainNorthCabuernigo	Sanchez-Velasco 2002					190
EUR	SpainNorthCantabrian	Sanchez-Velasco 2002				166	166
EUR	SpainPasValley	Sanchez-Velasco 2002				176	176
EUR mig	ArgentinaBuenosAires	Marcos 2000				314	314	314
EUR mig	BrazilBeloHorizonte	Middleton 2000			190
EUR mig	USACaucasianBethesda	Chanock 2000	272	264	258	290	342
EUR mig	USACaucasianHouston	Arnett 1995				388
EUR mig	USACaucasianPittsburgh	Oddis 1999				354
EUR mig	USAColoradoUnivCordBloodBankCaucasian	Clinimmune 2001				7660
EUR mig	USASanAntonioCaucasians	Murphey 2002	332	332	332	444		444
NAF	MoroccoSettatChaouya	Adorno 2001				196
NAM	MexicoMixeOaxaca	Begovich 2000					106		106
NAM	MexicoMixtecOaxaca	Begovich 2000					126		126
NAM	MexicoZaptotecOaxaca	Begovich 2000					170		170
NEA	JapanFukuoka	Begovich 2000					172		172	172
NEA	MongoliaKhalkha	Machulla 2002						400
NEA	SouthKoreapop1	Pyo 2000					648	648		648
NEA	SouthKoreapop2	Park 2001					414	414		414
NEA	Tuva	Begovich 2000					338
OCE	IndonesiaNusuTenaggarasandMoluccas	Begovich 2000					264		264	264
OCE	PapuaNewGuineaHighlanders	Begovich 2000					156
OCE	PapuaNewGuineaLowlanders	Begovich 2000					96
OTH mig	BrazilNortheast	Maciag 1998				410	410
OTH mig	BrazilSouthEastMulattos	Temin 2002						84
OTH mig	EcuadorAfricans	Begovich 2000					116
OTH mig	Jamaica	Kelly 1995					264
OTH mig	USAAfricanAmericanBethesda	Chanock 2000	202	188		142	176
OTH mig	USAColoradoUnivCordBloodBankAfricanAmerican	Clinimmune 2001				522
OTH mig	USAColoradoUnivCordBloodBankHispanic	Clinimmune 2001				2116
OTH mig	USASouthTexasHispanics	Murphey 2002	230	230	230	388		388
SAM	ArgentinaChiriguanos	Marcos 2000				108	108	108		108
SAM	ArgentinaTobaRosario	Marcos 2000	172		172	172	172	172
SAM	BrazilGuaraniKaiowa	Petzl-Erler 2000					310
SAM	BrazilGuaraniNandeva	Petzl-Erler 2000				172	172
SAM	BrazilKaingang	Tsuneto 2000				470	470
SAM	EcuadorCayapa	Begovich 2000					166
SEA	ChinaWuhan	Ferencik 1997						242
SEA	ChinaYichu	CHINA 2000					152
SEA	Thailand	Chandanayingyong 2002		284	284	284	284	284
SEA mig	USAColoradoUnivCordBloodBankAsian	Clinimmune 2001				200
SSA	Cameroon	Begovich 2000					344
SSA	CentralAfricanRepublicAkaPygmies	Halle 2001				186		186		186
SSA	CongoKinshasaBantu	Halle 2001					180	180		180
SSA	Gambia	Begovich 2000					292
SSA	UgandaMugandaBaganda	Begovich 2000					94
SWA	IndiaBombay	Begovich 2000					118
SWA	IndiaKhandeshPawra	Shankarkumar 1996	100	100	100
SWA	IndiaMumbaiMarathas	Shankarkumar 1997	182	182	182
SWA	IndiaNorthHindus	Rajalingam 2002			144
SWA	IndiaWestBhils	Shankarkumar 1996		100	100
SWA	IndiaWestCoastParsis	Shankarkumar 1997	100	100	100
SWA	IsraelNonAshkenaziJews	Martinez-Laso 1995					160	160
SWA mig	IsraelAshkenaziJews	Martinez-Laso 1995					160

The 12th IHW datasets

Here we provide a listing of the populations used.
Last 8 columns indicate the 2n sample size for each of the classical HLA loci studied.
Datasets available from http://geneva.unige.ch/IHWdata/.

region	popname	A	C	B	DRB1	DQA1	DQB1	DPA1	DPB1
EUR	Basque					330	316
EUR	Croat(Hvar)				212	212	208
EUR	Croat(Krk)				208	208	204
EUR	Finn_143				258		264
EUR	French				448	448	448
EUR	Polish				196	198	198
EUR	Pomaki				200	200	200		200
EUR	Spanish_100				200	200	200
EUR	Spanish_133				144	250	252		136
EUR mig	Russ_Pol_Jews	80	60	80	80	80	80
NAF	Algerian_100						200
NAF	Bedouin				196		196
NAF	Egyptian				158	156	158		158
NAF	Lybian_Jews	80	56	80	80	80	80
NAF	Moroccan_Jews	80	64	80	80	80	80
NAM	Mixe	104	104	104	104	104	104		104
NAM	Mixteco	104	102	104	104	104	104		104
NAM	Zapotec	144	152	142	148	152	152		144
NEA	Halkh				80	82	82	82
NEA	Hoton				170	168	168	170
NEA	Japanese	1216	230	1214	1216		230		230
NEA	Japanese_Kobe	64		64	64	60	64		60
NEA	Kazakh				78	78	78		76
NEA	Korean	146		134	398
NEA	Mongolian	122		68	406
NEA	Tuvinian								382
NEA	Uygur				132	132	132		124
OTH mig	Colombian(Af)				140	140	140		140
SAM	Colombian				434	434	434		434
SAM	Ecuadorian				198	198	198		198
SAM	Yukpa				146	146	140
SEA	Han				114	114	114		114
SEA	Paiwan_64				130
SEA	South_Han	322	324	324	324		324
SEA	Taiwanese	2014	398	1976	2024
SEA	Thai-Chinese	84			148
SSA	Amhara					196	196
SSA	Baganda				44
SWA	Hunza-Burushaski	92	92	92
SWA	North_Indian				240	240	240		236
SWA	Sindhi	78	78	78
SWA	Sri_Lankan				114
SWA mig	Zoroastrian				108		108

The 13th IHW datasets

Here we provide a listing of the populations used.
Last 8 columns indicate the 2n sample size for each of the classical HLA loci studied.
Datasets available from dbMHC at http://www.ncbi.nlm.nih.gov/gv/mhc/.

region	popname	A	C	B	DRB1	DQA1	DQB1	DPA1	DPB1
AUS	Cape_York	206	178	200	198	198	198		192
AUS	Groote_Eylandt	150	146	150
AUS	Kimberley	72	56	76	82	82	82		76
AUS	Yuendumu	382	384	386
EUR	Croatian	300		300
EUR	Czech	210	210	212	206	210	212		204
EUR	Finn_90	180	180	180	180		70		60
EUR	Georgian	210	214	216
EUR	Irish	2000	2000	2000	2000
EUR	Slovenian				200	200	200	200	200
EUR mig	Cuban(Eu)	138		140
EUR mig	North_America(Eu)	594	584	574
NAF	Algerian_99				198		198
NAF	Chaouya	134		136	198
NAF	Metalsa	144		136	198
NAF	Moroccan_98				196	196	196
NAF	Moroccan_99				182	192	192
NAM	Amerindian	514	496	468
NAM	Canoncito	82	82	82	80	80	80		80
NAM	Lacandon				324	324	324
NAM	Pima_99	172		178				194	190
NAM	Seri	66		66	66	66	66	50
NAM	Sioux				192	192	190		164
NAM	Yupik	504	298	504	504	116	502
NAM	Zuni				100	100	100		100
NEA	Buriat	280
NEA	Korean_200	400	400	400	398
NEA	Okinawan	210	210	208
NEA	Ryukuan	284
NEA	Tuva	378	348	360	378
OCE	American_Samoa	100	100	100
OCE	East_Timorese	114			166	172	172	172	172
OCE	Filipino	188	188	188	188		188	188	188
OCE	Indonesian	100	100	98
OCE	Ivatan	100	100	100	100
OCE	Moluccan	50			80	92	92	92	92
OCE	PNG_Highlander	184		150	174	184	182	156	176
OCE	PNG_Lowlander_48					96	96	96	96
OCE	PNG_Lowlander_95	158			160		182
OTH mig	Brazilian	194		178
OTH mig	Brazilian(Af_Eu)	198	212	138	198
OTH mig	Cuban(Af_Eu)	78		84
OTH mig	Mexican	120	58	80	408	408	408
OTH mig	North_America(Af)	510	504	502
OTH mig	North_America(Hi)	494	492	480
SAM	Bari	88	66	88
SAM	Guarani-Kaiowa	286	286	288	288	288	288
SAM	Guarani-Nandewa	104	104	106	106	106	106
SAM	Ticuna				98	98	98	92	98
SAM	Yanomamo				110	110	110		110
SEA	Ami_97	196	196	196	196
SEA	Atayal	212	212	212	212
SEA	Bunun	202	202	202	202
SEA	Hakka	110	110	110	110
SEA	Han-Chinese_149	298		298
SEA	Han-Chinese_572	1138		1144
SEA	Kinh				204		200
SEA	Malay	248	214	202	108		110		104
SEA	Muong				166		164
SEA	Paiwan_51	102	102	102	102
SEA	Puyuma_49	100	100	100	100
SEA	Rukai	100	100	100	100
SEA	Saisiat	102	102	102	102
SEA	Singapore(Chinese)	172		172
SEA	Thai	196	184	198
SEA	Toroko	110	110	110	110
SEA	Tsou	102	102	102	102
SEA	Yami	100	100	100	100
SEA mig	Chinese	564	562	562
SEA mig	Minnan	204	204	204	204
SEA mig	North_America(As)	822	802	792
SEA mig	Pazeh	110	110	110	110
SEA mig	Siraya	102	102	102	102
SEA mig	Thao	60	60	60	60
SSA	Doggon	276	258	276	276
SSA	Kenyan_142	286	224	286		238	226	258	246
SSA	Kenyan_Highlander	482	480	480
SSA	Kenyan_Lowlander	530	530	530
SSA	Mandenka	186		188
SSA	Rwandan				560		560
SSA	Shona	450	452	452	458	458	458		456
SSA	Ugandan	326	326	322
SSA	Zambian	86	90	88
SSA	Zulu	372	196	402	176	178	174		174
SWA	Arab_Druze	200	200	200
SWA	Kurdish	60	58	58
SWA	New_Delhi	132	112	132
SWA	Omani	238		240
SWA	South_Indian	176		208	218
SWA	Tamil	100	96	98
SWA	Turk				490	490	490
SWA mig	Israeli_Jews	234	188	218

Supporting online material

Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies

Index of population datasets

The literature datasets

The AlleleFrequencies.net datasets

The 12th IHW datasets

The 13th IHW datasets